{ "_id": "6a37a8d13efcd9bda442375e", "Package": "gglycan", "Title": "Plot Glycans using 'ggplot2'", "Version": "0.0.3", "Authors@R": "c(\nperson(given = \"Guangchuang\", family = \"Yu\", email = \"guangchuangyu@gmail.com\", role = c(\"aut\", \"cre\"), comment = c(ORCID = \"0000-0002-6485-8781\")))", "Description": "Plot glycans following the Symbol Nomenclature for Glycans\n(SNFG) using 'ggplot2'. SNFG provides a standardized visual\nrepresentation of glycan structures.", "License": "Artistic-2.0", "Encoding": "UTF-8", "VignetteBuilder": "quarto", "RoxygenNote": "7.3.3", "NeedsCompilation": "no", "Packaged": { "Date": "2026-06-21 09:00:01 UTC", "User": "root" }, "Author": "Guangchuang Yu [aut, cre] (ORCID:\n)", "Maintainer": "Guangchuang Yu ", "Config/pak/sysreqs": "libcairo2-dev cmake libfontconfig1-dev\nlibfreetype6-dev libglpk-dev make libpng-dev libuv1-dev\nlibxml2-dev", "Repository": "https://guangchuangyu.r-universe.dev", "Date/Publication": "2026-01-18 11:00:08 UTC", "RemoteUrl": "https://github.com/cran/gglycan", "RemoteRef": "HEAD", "RemoteSha": "391de0cc6312b77eb2c318d0343fe5e812061890", "MD5sum": "67b7a16c5973365bca18cc9b8d87aa59", "_user": "guangchuangyu", "_type": "src", "_file": "gglycan_0.0.3.tar.gz", "_fileid": "55ff826fb4b785e3eaf3a8ed7d0f0cd0a63bba348192584062fc3769c148411e", "_filesize": 325656, "_sha256": "55ff826fb4b785e3eaf3a8ed7d0f0cd0a63bba348192584062fc3769c148411e", "_created": "2026-06-21T09:00:01.000Z", "_published": "2026-06-21T09:03:13.758Z", "_distro": "noble", "_jobs": [ { "job": 82556913703, "time": 154, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "7773735589" }, { "job": 82556913723, "time": 156, "config": "linux-release-x86_64", "r": "4.6.0", "check": "OK", "artifact": "7773735908" }, { "job": 82556913665, "time": 131, "config": "macos-oldrel-arm64", "r": "4.5.3", "check": "OK", "artifact": "7773731850" }, { "job": 82556913677, "time": 127, "config": "macos-release-arm64", "r": "4.6.0", "check": "OK", "artifact": "7773731403" }, { "job": 82556703022, "time": 200, "config": "source", "r": "4.6.0", "check": "OK", "artifact": "7773712696" }, { "job": 82556913674, "time": 117, "config": "wasm-release", "r": "4.6.0", "check": "OK", "artifact": "7773730011" }, { "job": 82556913730, "time": 117, "config": "windows-devel", "r": "4.7.0", "check": "OK", "artifact": "7773730212" }, { "job": 82556913718, "time": 114, "config": "windows-oldrel", "r": "4.5.3", "check": "OK", "artifact": "7773729467" }, { "job": 82556913727, "time": 129, "config": "windows-release", "r": "4.6.0", "check": "OK", "artifact": "7773732021" } ], "_buildurl": "https://github.com/r-universe/guangchuangyu/actions/runs/27899331034", "_status": "success", "_host": "GitHub-Actions", "_upstream": "https://github.com/cran/gglycan", "_commit": { "id": "391de0cc6312b77eb2c318d0343fe5e812061890", "author": "Guangchuang Yu ", "committer": "cran-robot ", "message": "version 0.0.3\n", "time": 1768734008 }, "_maintainer": { "name": "Guangchuang Yu", "email": "guangchuangyu@gmail.com", "login": "guangchuangyu", "twitter": "@guangchuangyu", "description": "Professor of Bioinformatics at Southern Medical University.", "uuid": 626539, "orcid": "0000-0002-6485-8781" }, "_registered": true, "_dependencies": [ { "package": "R", "version": ">= 4.1.0", "role": "Depends" }, { "package": "dplyr", "role": "Imports" }, { "package": "ggplot2", "role": "Imports" }, { "package": "ggtangle", "version": ">= 0.1.0", "role": "Imports" }, { "package": "ggstar", "role": "Imports" }, { "package": "ggrepel", "role": "Imports" }, { "package": "igraph", "role": "Imports" }, { "package": "rlang", "role": "Imports" }, { "package": "yulab.utils", "role": "Imports" }, { "package": "quarto", "role": "Suggests" } ], "_owner": "cran", "_selfowned": true, "_usedby": 0, "_updates": [ { "week": "2026-03", "n": 1 } ], "_tags": [ { "name": "0.0.3", "date": "2026-01-18" } ], "_stars": 0, "_contributors": [ { "user": "guangchuangyu", "count": 1, "uuid": 626539 } ], "_userbio": { "uuid": 626539, "type": "user", "name": "Guangchuang Yu", "followers": 3111, "description": "Professor of Bioinformatics at Southern Medical University." }, "_downloads": { "count": 174, "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/gglycan" }, "_searchresults": 0, "_quarto": true, "_topics": [ "quarto" ], "_rbuild": "4.6.0", "_assets": [ "extra/citation.cff", "extra/citation.html", "extra/citation.json", "extra/citation.txt", "extra/contents.json", "extra/gglycan.html", "extra/NEWS.html", "extra/NEWS.txt", "extra/readme.html", "extra/readme.md", "manual.pdf" ], "_realowner": "guangchuangyu", "_cranurl": false, "_releases": [ { "version": "0.0.3", "date": "2026-01-18" } ], "_exports": [ "format_linkage_label", "geom_glycan", "get_hl_alpha", "gglycan", "highlight_motif", "match_snfg_style", "read_glycan", "set_hl_alpha", "snfg_map" ], "_help": [ { "page": "format_linkage_label", "title": "Format Linkage Labels", "topics": [ "format_linkage_label" ] }, { "page": "geom_glycan", "title": "Glycan Geometry Layer", "topics": [ "geom_glycan" ] }, { "page": "get_hl_alpha", "title": "Get Highlight Alpha", "topics": [ "get_hl_alpha" ] }, { "page": "gglycan", "title": "Plot Glycan Structure", "topics": [ "gglycan" ] }, { "page": "highlight_motif", "title": "Identify Motif in Glycan Graph", "topics": [ "highlight_motif" ] }, { "page": "match_snfg_style", "title": "Match SNFG Style to Graph Nodes", "topics": [ "match_snfg_style" ] }, { "page": "read_glycan", "title": "Read Glycan Data", "topics": [ "read_glycan" ] }, { "page": "set_hl_alpha", "title": "Set Highlight Alpha", "topics": [ "set_hl_alpha" ] }, { "page": "snfg_map", "title": "SNFG Symbol Mapping", "topics": [ "snfg_map" ] } ], "_readme": "https://github.com/cran/gglycan/raw/HEAD/README.md", "_rundeps": [ "base64enc", "bslib", "cachem", "cli", "cpp11", "digest", "dplyr", "evaluate", "farver", "fastmap", "fontawesome", "fontBitstreamVera", "fontLiberation", "fontquiver", "fs", "gdtools", "generics", "ggfun", "ggiraph", "ggplot2", "ggrepel", "ggstar", "ggtangle", "glue", "gridExtra", "gtable", "highr", "htmltools", "htmlwidgets", "igraph", "isoband", "jquerylib", "jsonlite", "knitr", "labeling", "lattice", "lifecycle", "magrittr", "MASS", "Matrix", "memoise", "mime", "pillar", "pkgconfig", "purrr", "R6", "rappdirs", "RColorBrewer", "Rcpp", "rlang", "rmarkdown", "S7", "sass", "scales", "systemfonts", "tibble", "tidyselect", "tinytex", "utf8", "vctrs", "viridisLite", "withr", "xfun", "yaml", "yulab.utils" ], "_vignettes": [ { "source": "gglycan.qmd", "filename": "gglycan.html", "title": "Getting Started with gglycan", "engine": "quarto::html", "headings": [ "Basic Usage", "Deconstructing Layers", "1. The Base Plot", "2. Customizing Edges", "3. Customizing Edge Labels", "4. Customizing Nodes (SNFG Symbols)", "5. Adding Text Labels", "Putting It All Together: A Highly Customized Plot", "Motif Highlighting" ], "created": "2026-01-18 11:00:08", "modified": "2026-01-18 11:00:08", "commits": 1 } ], "_score": 2.6989700043360187, "_indexed": true, "_nocasepkg": "gglycan", "_universes": [ "guangchuangyu" ], "_binaries": [ { "r": "4.7.0", "os": "linux", "version": "0.0.3", "date": "2026-06-21T09:02:22.000Z", "distro": "noble", "commit": "391de0cc6312b77eb2c318d0343fe5e812061890", "fileid": "f6d7ac526d9cde944a470074295f92903e8656ceaa63d71db0415ab8991058d9", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/guangchuangyu/actions/runs/27899331034" }, { "r": "4.6.0", "os": "linux", "version": "0.0.3", "date": "2026-06-21T09:02:22.000Z", "distro": "noble", "commit": "391de0cc6312b77eb2c318d0343fe5e812061890", "fileid": "751f8cda075fc234596802cba46e563a76c950e3a4f5498256662f66a45125fc", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/guangchuangyu/actions/runs/27899331034" }, { "r": "4.5.3", "os": "mac", "version": "0.0.3", "date": "2026-06-21T09:02:03.000Z", "commit": "391de0cc6312b77eb2c318d0343fe5e812061890", "fileid": "89af4ecc7e65255ff78ab43ba1070ef4192d7556ea7ff96f7d55f0669e64f2b4", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/guangchuangyu/actions/runs/27899331034" }, { "r": "4.6.0", "os": "mac", "version": "0.0.3", "date": "2026-06-21T09:02:01.000Z", "commit": "391de0cc6312b77eb2c318d0343fe5e812061890", "fileid": "92108b06b20f4ae39bb064a001bdd265b598e3c3b86f5ce278eb0ec913522bdb", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/guangchuangyu/actions/runs/27899331034" }, { "r": "4.6.0", "os": "wasm", "version": "0.0.3", "date": "2026-06-21T09:02:13.000Z", "commit": "391de0cc6312b77eb2c318d0343fe5e812061890", "fileid": "6f1529212fafa3ea09d097583cf155cb144d3975289afab373a41dd7ab1a8419", "status": "success", "buildurl": "https://github.com/r-universe/guangchuangyu/actions/runs/27899331034" }, { "r": "4.7.0", "os": "win", "version": "0.0.3", "date": "2026-06-21T09:01:45.000Z", "commit": "391de0cc6312b77eb2c318d0343fe5e812061890", "fileid": "6f86c53e1cc91ee8c6ea5cd9b09835c6e03274bf3a7c530327d645e29aeee06e", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/guangchuangyu/actions/runs/27899331034" }, { "r": "4.5.3", "os": "win", "version": "0.0.3", "date": "2026-06-21T09:01:36.000Z", "commit": "391de0cc6312b77eb2c318d0343fe5e812061890", "fileid": "ff94e2a8003aa001627bca9b25b83a0d01925abc895747a1f88e3bbb333f0829", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/guangchuangyu/actions/runs/27899331034" }, { "r": "4.6.0", "os": "win", "version": "0.0.3", "date": "2026-06-21T09:01:49.000Z", "commit": "391de0cc6312b77eb2c318d0343fe5e812061890", "fileid": "0fe32fb13998fc7bf9c09b4be75fca17395cf7d208385d44baa74e3afaea9f17", "status": "success", "check": "OK", "buildurl": "https://github.com/r-universe/guangchuangyu/actions/runs/27899331034" } ] }